Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 ARMC10P1-201ENST00000313754 855 ntBASIC15.16■□□□□ 0.02
SMIM11AP58511 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.16■□□□□ 0.02
SMIM11AP58511 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SMIM11AP58511 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.16■□□□□ 0.02
SMIM11AP58511 AL732292.2-201ENST00000609649 430 ntBASIC15.16■□□□□ 0.02
SMIM11AP58511 AL121772.3-201ENST00000610840 674 ntBASIC15.16■□□□□ 0.02
SMIM11AP58511 AL358472.4-201ENST00000633140 710 ntBASIC15.16■□□□□ 0.02
SMIM11AP58511 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 HYMAI-201ENST00000635591 3347 ntBASIC15.16■□□□□ 0.02
SMIM11AP58511 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SMIM11AP58511 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM11AP58511 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMIM11AP58511 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM11AP58511 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM11AP58511 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 AC005622.1-201ENST00000636801 1703 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM11AP58511 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 U82695.1-201ENST00000635752 1889 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 LAGE3P1-201ENST00000425356 484 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.15■□□□□ 0.02
SMIM11AP58511 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 SART3-203ENST00000546611 1184 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.15■□□□□ 0.02
SMIM11AP58511 AC008608.2-201ENST00000606089 416 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.15■□□□□ 0.02
SMIM11AP58511 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 AC103702.1-201ENST00000548801 2630 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM11AP58511 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM11AP58511 AC006504.4-201ENST00000592118 1568 ntBASIC15.15■□□□□ 0.02
SMIM11AP58511 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.15■□□□□ 0.02
SMIM11AP58511 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM11AP58511 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.14■□□□□ 0.01
SMIM11AP58511 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SMIM11AP58511 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 ELK2BP-201ENST00000415014 1224 ntBASIC15.14■□□□□ 0.01
SMIM11AP58511 FGFR3P6-201ENST00000457012 610 ntBASIC15.14■□□□□ 0.01
SMIM11AP58511 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.14■□□□□ 0.01
SMIM11AP58511 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms