Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 SCARNA20.5-201ENST00000516991 142 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 ACTG1P17-201ENST00000558391 1119 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 MIR4515-201ENST00000584082 81 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AC093726.1-201ENST00000608064 963 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AP003419.4-201ENST00000616071 517 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 FP475955.4-201ENST00000623131 1990 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL049757.1-201ENST00000616842 1596 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL009183.1-201ENST00000603760 355 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 AL589739.1-201ENST00000607720 493 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 RPSAP52-203ENST00000622976 1023 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.63□□□□□ -0.23
RIPPLY3P57055 SIRPAP1-201ENST00000448467 1770 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 AC135776.1-201ENST00000319817 2481 ntBASIC13.63□□□□□ -0.23
RIPPLY3P57055 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIPPLY3P57055 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 AC138028.6-201ENST00000616106 1482 ntBASIC13.62□□□□□ -0.23
RIPPLY3P57055 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIPPLY3P57055 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RIPPLY3P57055 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms