Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 AL627223.1-201ENST00000416693 442 ntBASIC12.2□□□□□ -0.46
CMC4P56277 RPS8P6-201ENST00000426177 609 ntBASIC12.2□□□□□ -0.46
CMC4P56277 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.2□□□□□ -0.46
CMC4P56277 DNAJB3-202ENST00000449667 1266 ntBASIC12.2□□□□□ -0.46
CMC4P56277 AC245100.5-201ENST00000452108 331 ntBASIC12.2□□□□□ -0.46
CMC4P56277 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CMC4P56277 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.2□□□□□ -0.46
CMC4P56277 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 ME2P1-201ENST00000426028 1970 ntBASIC12.19□□□□□ -0.46
CMC4P56277 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CMC4P56277 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.19□□□□□ -0.46
CMC4P56277 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.19□□□□□ -0.46
CMC4P56277 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.19□□□□□ -0.46
CMC4P56277 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.19□□□□□ -0.46
CMC4P56277 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.19□□□□□ -0.46
CMC4P56277 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.19□□□□□ -0.46
CMC4P56277 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.19□□□□□ -0.46
CMC4P56277 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.19□□□□□ -0.46
CMC4P56277 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.19□□□□□ -0.46
CMC4P56277 AP001160.2-201ENST00000596071 487 ntBASIC12.19□□□□□ -0.46
CMC4P56277 AL596442.2-201ENST00000610240 980 ntBASIC12.19□□□□□ -0.46
CMC4P56277 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CMC4P56277 AC009093.7-201ENST00000623853 1223 ntBASIC12.19□□□□□ -0.46
CMC4P56277 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 AL589702.1-201ENST00000641229 1509 ntBASIC12.19□□□□□ -0.46
CMC4P56277 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.19□□□□□ -0.46
CMC4P56277 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CMC4P56277 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.19□□□□□ -0.46
CMC4P56277 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CMC4P56277 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.18□□□□□ -0.46
CMC4P56277 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms