Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.08■□□□□ 0.16
CDH13P55290 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH13P55290 FAM185BP-201ENST00000443595 716 ntBASIC16.08■□□□□ 0.16
CDH13P55290 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDH13P55290 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CDH13P55290 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CDH13P55290 AC117500.6-201ENST00000624871 588 ntBASIC16.08■□□□□ 0.16
CDH13P55290 FAM215A-202ENST00000632077 792 ntBASIC16.08■□□□□ 0.16
CDH13P55290 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.08■□□□□ 0.16
CDH13P55290 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH13P55290 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH13P55290 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDH13P55290 CDC14C-201ENST00000428251 1719 ntBASIC16.08■□□□□ 0.16
CDH13P55290 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH13P55290 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH13P55290 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 LINC02447-202ENST00000501888 2146 ntBASIC16.07■□□□□ 0.16
CDH13P55290 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.07■□□□□ 0.16
CDH13P55290 AC092910.1-201ENST00000482027 1129 ntBASIC16.07■□□□□ 0.16
CDH13P55290 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.07■□□□□ 0.16
CDH13P55290 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 MIR4515-201ENST00000584082 81 ntBASIC16.07■□□□□ 0.16
CDH13P55290 AL049840.3-201ENST00000602669 611 ntBASIC16.07■□□□□ 0.16
CDH13P55290 AL691432.3-201ENST00000621860 400 ntBASIC16.07■□□□□ 0.16
CDH13P55290 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH13P55290 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDH13P55290 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH13P55290 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 AL596257.1-201ENST00000641463 2694 ntBASIC16.06■□□□□ 0.16
CDH13P55290 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 RPS2P28-201ENST00000314255 741 ntBASIC16.06■□□□□ 0.16
CDH13P55290 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH13P55290 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
CDH13P55290 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 HMGA1P7-201ENST00000406908 502 ntBASIC16.06■□□□□ 0.16
CDH13P55290 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH13P55290 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.06■□□□□ 0.16
CDH13P55290 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH13P55290 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH13P55290 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH13P55290 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH13P55290 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDH13P55290 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH13P55290 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 AC112504.1-201ENST00000623415 1841 ntBASIC16.05■□□□□ 0.16
CDH13P55290 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms