Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 MIR648-201ENST00000385046 94 ntBASIC16.19■□□□□ 0.18
CDKN2DP55273 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2DP55273 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDKN2DP55273 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.19■□□□□ 0.18
CDKN2DP55273 PDPK2P-202ENST00000562415 1191 ntBASIC16.19■□□□□ 0.18
CDKN2DP55273 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2DP55273 AC120114.3-201ENST00000611923 658 ntBASIC16.19■□□□□ 0.18
CDKN2DP55273 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CDKN2DP55273 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2DP55273 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2DP55273 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2DP55273 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 AC073439.1-201ENST00000624121 1774 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 ZNF259P1-201ENST00000407656 1365 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDKN2DP55273 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 AC074386.1-202ENST00000463561 864 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.18■□□□□ 0.18
CDKN2DP55273 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKN2DP55273 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 AP002472.1-201ENST00000577490 586 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKN2DP55273 AC140113.2-201ENST00000604370 208 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 AC068137.2-201ENST00000605408 478 ntBASIC16.18■□□□□ 0.18
CDKN2DP55273 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.18■□□□□ 0.18
CDKN2DP55273 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKN2DP55273 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2DP55273 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2DP55273 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2DP55273 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CDKN2DP55273 AC106730.1-201ENST00000566722 1090 ntBASIC16.17■□□□□ 0.18
CDKN2DP55273 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CDKN2DP55273 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2DP55273 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2DP55273 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms