Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR6069-201ENST00000620069 79 ntBASIC17.04■□□□□ 0.32
EPHB3P54753 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.04■□□□□ 0.32
EPHB3P54753 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.04■□□□□ 0.32
EPHB3P54753 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.04■□□□□ 0.32
EPHB3P54753 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
EPHB3P54753 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB3P54753 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EPHB3P54753 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.04■□□□□ 0.32
EPHB3P54753 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB3P54753 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
EPHB3P54753 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB3P54753 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB3P54753 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EPHB3P54753 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.04■□□□□ 0.32
EPHB3P54753 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
EPHB3P54753 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 RN7SL692P-201ENST00000464677 288 ntBASIC17.03■□□□□ 0.32
EPHB3P54753 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHB3P54753 AC044860.1-202ENST00000559481 777 ntBASIC17.03■□□□□ 0.32
EPHB3P54753 AL596325.1-201ENST00000563991 1082 ntBASIC17.03■□□□□ 0.32
EPHB3P54753 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.03■□□□□ 0.32
EPHB3P54753 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 HLA-A-202ENST00000376806 1854 ntBASIC17.03■□□□□ 0.32
EPHB3P54753 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EPHB3P54753 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB3P54753 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHB3P54753 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EPHB3P54753 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHB3P54753 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 AC244107.1-201ENST00000442033 332 ntBASIC17.02■□□□□ 0.32
EPHB3P54753 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.02■□□□□ 0.32
EPHB3P54753 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 SDHAP3-202ENST00000515467 728 ntBASIC17.02■□□□□ 0.32
EPHB3P54753 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 CR383656.12-201ENST00000549567 513 ntBASIC17.02■□□□□ 0.32
EPHB3P54753 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.02■□□□□ 0.32
EPHB3P54753 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 AC104794.3-201ENST00000566840 1248 ntBASIC17.02■□□□□ 0.32
EPHB3P54753 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 MIR4321-201ENST00000592276 80 ntBASIC17.02■□□□□ 0.32
EPHB3P54753 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHB3P54753 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB3P54753 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
EPHB3P54753 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.02■□□□□ 0.31
EPHB3P54753 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.02■□□□□ 0.31
EPHB3P54753 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
EPHB3P54753 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
EPHB3P54753 AC026471.1-201ENST00000564629 3026 ntBASIC17.02■□□□□ 0.31
EPHB3P54753 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EPHB3P54753 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHB3P54753 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
EPHB3P54753 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
EPHB3P54753 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHB3P54753 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EPHB3P54753 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHB3P54753 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.01■□□□□ 0.31
EPHB3P54753 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHB3P54753 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHB3P54753 POU5F1P6-201ENST00000466990 990 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms