Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.03■□□□□ 0.48
PMS1P54277 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.03■□□□□ 0.48
PMS1P54277 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.03■□□□□ 0.48
PMS1P54277 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.03■□□□□ 0.48
PMS1P54277 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.03■□□□□ 0.48
PMS1P54277 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PMS1P54277 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.03■□□□□ 0.48
PMS1P54277 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PMS1P54277 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PMS1P54277 AC073439.1-201ENST00000624121 1774 ntBASIC18.02■□□□□ 0.48
PMS1P54277 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.02■□□□□ 0.48
PMS1P54277 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.02■□□□□ 0.48
PMS1P54277 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.02■□□□□ 0.48
PMS1P54277 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.02■□□□□ 0.48
PMS1P54277 AC008677.1-201ENST00000519230 1561 ntBASIC18.02■□□□□ 0.48
PMS1P54277 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.02■□□□□ 0.48
PMS1P54277 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.02■□□□□ 0.48
PMS1P54277 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.02■□□□□ 0.48
PMS1P54277 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.02■□□□□ 0.48
PMS1P54277 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.02■□□□□ 0.48
PMS1P54277 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.02■□□□□ 0.48
PMS1P54277 AC092865.6-201ENST00000642101 219 ntBASIC18.02■□□□□ 0.48
PMS1P54277 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMS1P54277 HYMAI-201ENST00000635591 3347 ntBASIC18.02■□□□□ 0.48
PMS1P54277 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.02■□□□□ 0.47
PMS1P54277 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PMS1P54277 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.02■□□□□ 0.47
PMS1P54277 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.02■□□□□ 0.47
PMS1P54277 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.02■□□□□ 0.47
PMS1P54277 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PMS1P54277 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PMS1P54277 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PMS1P54277 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PMS1P54277 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PMS1P54277 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PMS1P54277 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 MIR648-201ENST00000385046 94 ntBASIC18.01■□□□□ 0.47
PMS1P54277 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 AL590627.1-203ENST00000421194 1026 ntBASIC18.01■□□□□ 0.47
PMS1P54277 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.01■□□□□ 0.47
PMS1P54277 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
PMS1P54277 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms