Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.84■□□□□ 0.29
ATXN3P54252 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.84■□□□□ 0.29
ATXN3P54252 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.84■□□□□ 0.29
ATXN3P54252 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ATXN3P54252 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
ATXN3P54252 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATXN3P54252 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.84■□□□□ 0.29
ATXN3P54252 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATXN3P54252 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ATXN3P54252 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATXN3P54252 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATXN3P54252 AL596257.1-201ENST00000641463 2694 ntBASIC16.83■□□□□ 0.29
ATXN3P54252 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.83■□□□□ 0.29
ATXN3P54252 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATXN3P54252 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATXN3P54252 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 RBPMS2P1-201ENST00000437762 623 ntBASIC16.83■□□□□ 0.28
ATXN3P54252 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATXN3P54252 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.83■□□□□ 0.28
ATXN3P54252 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.83■□□□□ 0.28
ATXN3P54252 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 AC005225.4-201ENST00000557330 545 ntBASIC16.83■□□□□ 0.28
ATXN3P54252 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.83■□□□□ 0.28
ATXN3P54252 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 AL603756.1-201ENST00000606511 2163 ntBASIC16.83■□□□□ 0.28
ATXN3P54252 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.83■□□□□ 0.28
ATXN3P54252 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.83■□□□□ 0.28
ATXN3P54252 PKD1P5-201ENST00000532415 10291 ntBASIC16.83■□□□□ 0.28
ATXN3P54252 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATXN3P54252 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATXN3P54252 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATXN3P54252 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATXN3P54252 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 AL512356.2-201ENST00000546955 174 ntBASIC16.82■□□□□ 0.28
ATXN3P54252 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.82■□□□□ 0.28
ATXN3P54252 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 AC099522.2-201ENST00000607001 744 ntBASIC16.82■□□□□ 0.28
ATXN3P54252 AP001059.3-201ENST00000619053 235 ntBASIC16.82■□□□□ 0.28
ATXN3P54252 AL161645.1-201ENST00000622716 1255 ntBASIC16.82■□□□□ 0.28
ATXN3P54252 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.82■□□□□ 0.28
ATXN3P54252 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms