Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 AC092171.3-201ENST00000610122 2651 ntBASIC16.94■□□□□ 0.3
COPAP53621 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 AC092068.3-201ENST00000587894 2016 ntBASIC16.94■□□□□ 0.3
COPAP53621 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 AC087641.1-201ENST00000557561 1021 ntBASIC16.94■□□□□ 0.3
COPAP53621 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 MIR3909-201ENST00000579518 119 ntBASIC16.94■□□□□ 0.3
COPAP53621 MPDU1-223ENST00000582151 728 ntBASIC16.94■□□□□ 0.3
COPAP53621 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 AL096865.1-201ENST00000606796 927 ntBASIC16.94■□□□□ 0.3
COPAP53621 AP001059.3-201ENST00000619053 235 ntBASIC16.94■□□□□ 0.3
COPAP53621 AC084121.4-201ENST00000641598 221 ntBASIC16.94■□□□□ 0.3
COPAP53621 AF228730.8-201ENST00000642140 221 ntBASIC16.94■□□□□ 0.3
COPAP53621 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 WASH6P-202ENST00000359512 1437 ntBASIC16.94■□□□□ 0.3
COPAP53621 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.94■□□□□ 0.3
COPAP53621 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.94■□□□□ 0.3
COPAP53621 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPAP53621 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.94■□□□□ 0.3
COPAP53621 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
COPAP53621 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 AC131009.4-201ENST00000624048 1740 ntBASIC16.93■□□□□ 0.3
COPAP53621 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.93■□□□□ 0.3
COPAP53621 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 RBPMS2P1-201ENST00000437762 623 ntBASIC16.93■□□□□ 0.3
COPAP53621 AC067863.1-201ENST00000494933 530 ntBASIC16.93■□□□□ 0.3
COPAP53621 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.93■□□□□ 0.3
COPAP53621 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 DUX4L27-201ENST00000554796 1261 ntBASIC16.93■□□□□ 0.3
COPAP53621 KRT8P23-201ENST00000560090 1207 ntBASIC16.93■□□□□ 0.3
COPAP53621 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.93■□□□□ 0.3
COPAP53621 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.93■□□□□ 0.3
COPAP53621 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.93■□□□□ 0.3
COPAP53621 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
COPAP53621 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms