Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF140P52738 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF140P52738 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 AL592309.1-201ENST00000443127 649 ntBASIC16.28■□□□□ 0.2
ZNF140P52738 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF140P52738 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF140P52738 MIR4321-201ENST00000592276 80 ntBASIC16.28■□□□□ 0.2
ZNF140P52738 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF140P52738 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ZNF140P52738 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF140P52738 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF140P52738 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF140P52738 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF140P52738 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF140P52738 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
ZNF140P52738 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF140P52738 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF140P52738 AC092865.5-201ENST00000545435 363 ntBASIC16.27■□□□□ 0.2
ZNF140P52738 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF140P52738 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF140P52738 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
ZNF140P52738 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF140P52738 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.27■□□□□ 0.19
ZNF140P52738 AC069224.1-201ENST00000566372 1715 ntBASIC16.27■□□□□ 0.19
ZNF140P52738 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
ZNF140P52738 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.19
ZNF140P52738 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF140P52738 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.27■□□□□ 0.19
ZNF140P52738 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF140P52738 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF140P52738 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF140P52738 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 AC008677.1-201ENST00000519230 1561 ntBASIC16.26■□□□□ 0.19
ZNF140P52738 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF140P52738 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.26■□□□□ 0.19
ZNF140P52738 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF140P52738 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 IGHV3-62-201ENST00000520057 340 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms