Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SNX29P1-201ENST00000548357 1007 ntBASIC18.02■□□□□ 0.48
CDK7P50613 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.02■□□□□ 0.48
CDK7P50613 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.02■□□□□ 0.48
CDK7P50613 RRP7BP-205ENST00000566851 833 ntBASIC18.02■□□□□ 0.48
CDK7P50613 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.02■□□□□ 0.48
CDK7P50613 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
CDK7P50613 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.02■□□□□ 0.47
CDK7P50613 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK7P50613 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDK7P50613 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.02■□□□□ 0.47
CDK7P50613 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.02■□□□□ 0.47
CDK7P50613 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK7P50613 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.47
CDK7P50613 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDK7P50613 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK7P50613 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.02■□□□□ 0.47
CDK7P50613 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.02■□□□□ 0.47
CDK7P50613 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDK7P50613 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDK7P50613 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK7P50613 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK7P50613 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDK7P50613 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.01■□□□□ 0.47
CDK7P50613 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.01■□□□□ 0.47
CDK7P50613 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.01■□□□□ 0.47
CDK7P50613 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.01■□□□□ 0.47
CDK7P50613 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK7P50613 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.01■□□□□ 0.47
CDK7P50613 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.01■□□□□ 0.47
CDK7P50613 AL139011.1-202ENST00000642063 584 ntBASIC18.01■□□□□ 0.47
CDK7P50613 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 REXO1L6P-201ENST00000603433 1515 ntBASIC18.01■□□□□ 0.47
CDK7P50613 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK7P50613 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK7P50613 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18■□□□□ 0.47
CDK7P50613 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CDK7P50613 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18■□□□□ 0.47
CDK7P50613 AC011270.2-201ENST00000624293 2550 ntBASIC18■□□□□ 0.47
CDK7P50613 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDK7P50613 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK7P50613 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18■□□□□ 0.47
CDK7P50613 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK7P50613 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDK7P50613 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18■□□□□ 0.47
CDK7P50613 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CDK7P50613 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18■□□□□ 0.47
CDK7P50613 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CDK7P50613 KRT223P-202ENST00000449164 1292 ntBASIC18■□□□□ 0.47
CDK7P50613 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18■□□□□ 0.47
CDK7P50613 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18■□□□□ 0.47
CDK7P50613 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18■□□□□ 0.47
CDK7P50613 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDK7P50613 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18■□□□□ 0.47
CDK7P50613 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDK7P50613 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK7P50613 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.99■□□□□ 0.47
CDK7P50613 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.99■□□□□ 0.47
CDK7P50613 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDK7P50613 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK7P50613 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CDK7P50613 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms