Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2AP49459 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 AC073957.3-201ENST00000609998 6758 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 AC008741.2-201ENST00000612792 3115 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2AP49459 TSPY19P-201ENST00000418461 509 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2AP49459 TSPY18P-201ENST00000441642 509 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2AP49459 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2AP49459 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 SART3-203ENST00000546611 1184 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 TERC-201ENST00000602385 541 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 REXO1L6P-202ENST00000619970 1078 ntBASIC10.46□□□□□ -0.73
UBE2AP49459 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2AP49459 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2AP49459 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
UBE2AP49459 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.46□□□□□ -0.74
UBE2AP49459 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.74
UBE2AP49459 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
UBE2AP49459 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2AP49459 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2AP49459 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2AP49459 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 CASK-202ENST00000378158 3848 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2AP49459 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC10.45□□□□□ -0.74
UBE2AP49459 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2AP49459 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2AP49459 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UBE2AP49459 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms