Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
GRIK1P39086 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.24■□□□□ 0.35
GRIK1P39086 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIK1P39086 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
GRIK1P39086 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GRIK1P39086 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIK1P39086 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 AC097493.3-201ENST00000509725 367 ntBASIC17.24■□□□□ 0.35
GRIK1P39086 RNA5SP421-201ENST00000516864 134 ntBASIC17.24■□□□□ 0.35
GRIK1P39086 SPCS2P1-201ENST00000561636 679 ntBASIC17.24■□□□□ 0.35
GRIK1P39086 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
GRIK1P39086 AL158211.3-201ENST00000607385 239 ntBASIC17.24■□□□□ 0.35
GRIK1P39086 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 AGGF1P2-201ENST00000426656 2106 ntBASIC17.24■□□□□ 0.35
GRIK1P39086 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIK1P39086 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GRIK1P39086 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GRIK1P39086 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 U82695.1-201ENST00000635752 1889 ntBASIC17.23■□□□□ 0.35
GRIK1P39086 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.23■□□□□ 0.35
GRIK1P39086 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.23■□□□□ 0.35
GRIK1P39086 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.23■□□□□ 0.35
GRIK1P39086 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
GRIK1P39086 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.23■□□□□ 0.35
GRIK1P39086 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.23■□□□□ 0.35
GRIK1P39086 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 AL390754.1-201ENST00000619088 582 ntBASIC17.23■□□□□ 0.35
GRIK1P39086 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GRIK1P39086 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GRIK1P39086 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
GRIK1P39086 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIK1P39086 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GRIK1P39086 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.22■□□□□ 0.35
GRIK1P39086 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 MTND6P24-201ENST00000440466 518 ntBASIC17.22■□□□□ 0.35
GRIK1P39086 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.22■□□□□ 0.35
GRIK1P39086 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GRIK1P39086 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GRIK1P39086 INGX-202ENST00000489074 768 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms