Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 NSUN5P1-202ENST00000421140 1535 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 NSUN5P2-203ENST00000457352 1529 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 AC016027.1-202ENST00000607927 1699 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCN1P35523 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.72■□□□□ 0.59
CLCN1P35523 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCN1P35523 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 AL390755.1-201ENST00000623716 2027 ntBASIC18.71■□□□□ 0.59
CLCN1P35523 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCN1P35523 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 ATP5G2P1-201ENST00000433580 426 ntBASIC18.71■□□□□ 0.59
CLCN1P35523 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.71■□□□□ 0.59
CLCN1P35523 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN1P35523 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN1P35523 IGHV3-52-201ENST00000519770 353 ntBASIC18.71■□□□□ 0.59
CLCN1P35523 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN1P35523 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLCN1P35523 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN1P35523 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 CICP20-201ENST00000443330 2801 ntBASIC18.71■□□□□ 0.59
CLCN1P35523 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLCN1P35523 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCN1P35523 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN1P35523 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLCN1P35523 AL353593.2-201ENST00000602529 1483 ntBASIC18.71■□□□□ 0.59
CLCN1P35523 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.7■□□□□ 0.58
CLCN1P35523 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.7■□□□□ 0.58
CLCN1P35523 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 MYCLP1-201ENST00000372451 1075 ntBASIC18.7■□□□□ 0.58
CLCN1P35523 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN1P35523 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN1P35523 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN1P35523 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN1P35523 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN1P35523 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN1P35523 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLCN1P35523 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CLCN1P35523 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN1P35523 INTS4P1-201ENST00000438455 1935 ntBASIC18.7■□□□□ 0.58
CLCN1P35523 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCN1P35523 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN1P35523 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLCN1P35523 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN1P35523 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN1P35523 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN1P35523 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN1P35523 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN1P35523 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN1P35523 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CLCN1P35523 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 RCN1P2-201ENST00000398357 915 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN1P35523 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 AC074051.2-201ENST00000565115 352 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms