Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC6A4P31645 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SLC6A4P31645 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A4P31645 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A4P31645 MTND6P24-201ENST00000440466 518 ntBASIC16.76■□□□□ 0.27
SLC6A4P31645 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC6A4P31645 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.76■□□□□ 0.27
SLC6A4P31645 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC6A4P31645 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A4P31645 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC6A4P31645 AL138828.2-201ENST00000615812 383 ntBASIC16.76■□□□□ 0.27
SLC6A4P31645 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A4P31645 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A4P31645 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A4P31645 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 AL035456.1-201ENST00000456064 1369 ntBASIC16.76■□□□□ 0.27
SLC6A4P31645 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A4P31645 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 BCRP1-201ENST00000444246 691 ntBASIC16.75■□□□□ 0.27
SLC6A4P31645 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC6A4P31645 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A4P31645 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A4P31645 MIR4321-201ENST00000592276 80 ntBASIC16.75■□□□□ 0.27
SLC6A4P31645 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 AC073592.8-201ENST00000624126 511 ntBASIC16.75■□□□□ 0.27
SLC6A4P31645 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SLC6A4P31645 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC6A4P31645 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A4P31645 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A4P31645 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
SLC6A4P31645 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC6A4P31645 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC6A4P31645 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A4P31645 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC6A4P31645 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC6A4P31645 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A4P31645 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AC027369.6-201ENST00000525520 931 ntBASIC16.74■□□□□ 0.27
SLC6A4P31645 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AC011467.4-201ENST00000594891 528 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms