Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RXRBP28702 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.03■□□□□ 0.96
RXRBP28702 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RXRBP28702 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.03■□□□□ 0.96
RXRBP28702 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.03■□□□□ 0.96
RXRBP28702 TARDBPP1-201ENST00000442013 1203 ntBASIC21.03■□□□□ 0.96
RXRBP28702 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.03■□□□□ 0.96
RXRBP28702 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.03■□□□□ 0.96
RXRBP28702 CTBP2P4-201ENST00000513884 920 ntBASIC21.03■□□□□ 0.96
RXRBP28702 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RXRBP28702 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.03■□□□□ 0.96
RXRBP28702 AC132192.2-201ENST00000596206 1147 ntBASIC21.03■□□□□ 0.96
RXRBP28702 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.03■□□□□ 0.96
RXRBP28702 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RXRBP28702 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.02■□□□□ 0.96
RXRBP28702 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.02■□□□□ 0.96
RXRBP28702 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC21.02■□□□□ 0.96
RXRBP28702 CNN2P10-201ENST00000443067 918 ntBASIC21.02■□□□□ 0.96
RXRBP28702 AC022217.1-201ENST00000521069 738 ntBASIC21.02■□□□□ 0.96
RXRBP28702 CENPX-208ENST00000584347 799 ntTSL 2 BASIC21.02■□□□□ 0.96
RXRBP28702 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.02■□□□□ 0.96
RXRBP28702 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 AL645939.5-201ENST00000606834 243 ntBASIC21.02■□□□□ 0.96
RXRBP28702 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RXRBP28702 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RXRBP28702 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RXRBP28702 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RXRBP28702 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RXRBP28702 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
RXRBP28702 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RXRBP28702 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RXRBP28702 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RXRBP28702 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.01■□□□□ 0.95
RXRBP28702 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 AZGP1P1-201ENST00000411909 902 ntBASIC21.01■□□□□ 0.95
RXRBP28702 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.01■□□□□ 0.95
RXRBP28702 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC21.01■□□□□ 0.95
RXRBP28702 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 AL161670.2-201ENST00000557650 1227 ntBASIC21.01■□□□□ 0.95
RXRBP28702 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.01■□□□□ 0.95
RXRBP28702 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.01■□□□□ 0.95
RXRBP28702 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 AC100757.4-201ENST00000626934 759 ntBASIC21.01■□□□□ 0.95
RXRBP28702 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RXRBP28702 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 AL023775.1-201ENST00000454907 1746 ntBASIC21.01■□□□□ 0.95
RXRBP28702 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.01■□□□□ 0.95
RXRBP28702 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RXRBP28702 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RXRBP28702 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RXRBP28702 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RXRBP28702 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21■□□□□ 0.95
RXRBP28702 AC026316.1-201ENST00000398900 414 ntBASIC21■□□□□ 0.95
RXRBP28702 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21■□□□□ 0.95
RXRBP28702 ACTG1P2-201ENST00000415776 1125 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms