Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 HYMAI-201ENST00000635591 3347 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
GABRB3P28472 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 IL9RP2-201ENST00000423948 1312 ntBASIC16.28■□□□□ 0.2
GABRB3P28472 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRB3P28472 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRB3P28472 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.28■□□□□ 0.2
GABRB3P28472 AC007967.2-201ENST00000432613 625 ntBASIC16.28■□□□□ 0.2
GABRB3P28472 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRB3P28472 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRB3P28472 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRB3P28472 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRB3P28472 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRB3P28472 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRB3P28472 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRB3P28472 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GABRB3P28472 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GABRB3P28472 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRB3P28472 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GABRB3P28472 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
GABRB3P28472 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRB3P28472 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRB3P28472 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.27■□□□□ 0.2
GABRB3P28472 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRB3P28472 AL121894.2-201ENST00000602977 491 ntBASIC16.27■□□□□ 0.2
GABRB3P28472 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRB3P28472 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRB3P28472 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRB3P28472 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.27■□□□□ 0.19
GABRB3P28472 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
GABRB3P28472 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRB3P28472 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.27■□□□□ 0.19
GABRB3P28472 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRB3P28472 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRB3P28472 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.26■□□□□ 0.19
GABRB3P28472 AC073439.1-201ENST00000624121 1774 ntBASIC16.26■□□□□ 0.19
GABRB3P28472 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRB3P28472 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 PRAL-201ENST00000624952 3286 ntBASIC16.26■□□□□ 0.19
GABRB3P28472 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.26■□□□□ 0.19
GABRB3P28472 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
GABRB3P28472 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRB3P28472 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.26■□□□□ 0.19
GABRB3P28472 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRB3P28472 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRB3P28472 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms