Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL1P22362 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL1P22362 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL1P22362 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL1P22362 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 Z83851.2-201ENST00000609564 659 ntBASIC14.09□□□□□ -0.15
CCL1P22362 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL1P22362 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL1P22362 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.09□□□□□ -0.15
CCL1P22362 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL1P22362 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL1P22362 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL1P22362 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL1P22362 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CCL1P22362 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL1P22362 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CCL1P22362 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CCL1P22362 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.08□□□□□ -0.16
CCL1P22362 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL1P22362 AC002347.1-201ENST00000569543 541 ntBASIC14.08□□□□□ -0.16
CCL1P22362 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL1P22362 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CCL1P22362 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL1P22362 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 AL589702.1-201ENST00000641229 1509 ntBASIC14.08□□□□□ -0.16
CCL1P22362 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL1P22362 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCL1P22362 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL1P22362 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL1P22362 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL1P22362 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCL1P22362 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL1P22362 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL1P22362 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL1P22362 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL1P22362 AC145285.3-201ENST00000564603 959 ntBASIC14.07□□□□□ -0.16
CCL1P22362 MIR4321-201ENST00000592276 80 ntBASIC14.07□□□□□ -0.16
CCL1P22362 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL1P22362 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL1P22362 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL1P22362 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCL1P22362 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL1P22362 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms