Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB3BP20337 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3BP20337 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB3BP20337 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 KRT8P26-201ENST00000534154 1276 ntBASIC14.43□□□□□ -0.1
RAB3BP20337 AC011498.5-201ENST00000592027 486 ntBASIC14.43□□□□□ -0.1
RAB3BP20337 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3BP20337 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 AC010654.1-201ENST00000615722 808 ntBASIC14.43□□□□□ -0.1
RAB3BP20337 TMEM191A-211ENST00000637163 1067 ntBASIC14.43□□□□□ -0.1
RAB3BP20337 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB3BP20337 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RAB3BP20337 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3BP20337 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
RAB3BP20337 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB3BP20337 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB3BP20337 AK4P3-201ENST00000418260 669 ntBASIC14.42□□□□□ -0.1
RAB3BP20337 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3BP20337 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3BP20337 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3BP20337 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3BP20337 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAB3BP20337 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.41□□□□□ -0.1
RAB3BP20337 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3BP20337 AP005901.3-202ENST00000581653 237 ntBASIC14.41□□□□□ -0.1
RAB3BP20337 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3BP20337 AL353135.1-201ENST00000606729 504 ntBASIC14.41□□□□□ -0.1
RAB3BP20337 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3BP20337 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3BP20337 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3BP20337 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms