Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT4P19013 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT4P19013 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT4P19013 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT4P19013 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT4P19013 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.51■□□□□ 0.23
KRT4P19013 AC012615.1-201ENST00000565797 1299 ntBASIC16.51■□□□□ 0.23
KRT4P19013 MIR3180-1-201ENST00000580374 94 ntBASIC16.51■□□□□ 0.23
KRT4P19013 MIR3180-3-201ENST00000584616 94 ntBASIC16.51■□□□□ 0.23
KRT4P19013 NKAPP1-205ENST00000585790 367 ntBASIC16.51■□□□□ 0.23
KRT4P19013 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 AL136379.1-201ENST00000623471 2642 ntBASIC16.51■□□□□ 0.23
KRT4P19013 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT4P19013 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT4P19013 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.51■□□□□ 0.23
KRT4P19013 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT4P19013 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KRT4P19013 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KRT4P19013 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT4P19013 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.5■□□□□ 0.23
KRT4P19013 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 AC132008.2-207ENST00000454517 770 ntBASIC16.5■□□□□ 0.23
KRT4P19013 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT4P19013 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 AF228730.7-201ENST00000641842 219 ntBASIC16.5■□□□□ 0.23
KRT4P19013 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT4P19013 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT4P19013 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT4P19013 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
KRT4P19013 AC006058.4-201ENST00000624016 1670 ntBASIC16.5■□□□□ 0.23
KRT4P19013 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT4P19013 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
KRT4P19013 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 PI4KAP1-204ENST00000612579 1703 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms