Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 UPF3AP3-201ENST00000420996 769 ntBASIC16.55■□□□□ 0.24
VCLP18206 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.55■□□□□ 0.24
VCLP18206 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 MPDU1-223ENST00000582151 728 ntBASIC16.55■□□□□ 0.24
VCLP18206 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 C20orf181-201ENST00000623918 480 ntBASIC16.55■□□□□ 0.24
VCLP18206 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VCLP18206 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 AC131009.4-201ENST00000624048 1740 ntBASIC16.55■□□□□ 0.24
VCLP18206 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VCLP18206 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
VCLP18206 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.55■□□□□ 0.24
VCLP18206 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
VCLP18206 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCLP18206 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.54■□□□□ 0.24
VCLP18206 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.54■□□□□ 0.24
VCLP18206 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VCLP18206 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.54■□□□□ 0.24
VCLP18206 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.54■□□□□ 0.24
VCLP18206 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.54■□□□□ 0.24
VCLP18206 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.54■□□□□ 0.24
VCLP18206 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.54■□□□□ 0.24
VCLP18206 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
VCLP18206 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.54■□□□□ 0.24
VCLP18206 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.54■□□□□ 0.24
VCLP18206 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.54■□□□□ 0.24
VCLP18206 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VCLP18206 AC104640.1-201ENST00000562617 2109 ntBASIC16.54■□□□□ 0.24
VCLP18206 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VCLP18206 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 HLA-A-202ENST00000376806 1854 ntBASIC16.53■□□□□ 0.24
VCLP18206 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.53■□□□□ 0.24
VCLP18206 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.53■□□□□ 0.24
VCLP18206 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.53■□□□□ 0.24
VCLP18206 GPX1P2-201ENST00000429271 606 ntBASIC16.53■□□□□ 0.24
VCLP18206 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.53■□□□□ 0.24
VCLP18206 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 AC112191.1-201ENST00000523689 701 ntBASIC16.53■□□□□ 0.24
VCLP18206 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.53■□□□□ 0.24
VCLP18206 AC005829.1-201ENST00000570002 483 ntBASIC16.53■□□□□ 0.24
VCLP18206 AC010327.4-202ENST00000591484 748 ntBASIC16.53■□□□□ 0.24
VCLP18206 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.53■□□□□ 0.24
VCLP18206 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.53■□□□□ 0.24
VCLP18206 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCLP18206 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VCLP18206 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms