Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.1■□□□□ 0.33
PSMC3P17980 SPTLC1P1-201ENST00000447199 261 ntBASIC17.1■□□□□ 0.33
PSMC3P17980 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.1■□□□□ 0.33
PSMC3P17980 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.1■□□□□ 0.33
PSMC3P17980 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 AL596325.1-201ENST00000563991 1082 ntBASIC17.1■□□□□ 0.33
PSMC3P17980 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMC3P17980 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMC3P17980 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PSMC3P17980 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMC3P17980 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
PSMC3P17980 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PSMC3P17980 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PSMC3P17980 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMC3P17980 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.1■□□□□ 0.33
PSMC3P17980 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
PSMC3P17980 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 FAM220BP-201ENST00000377689 816 ntBASIC17.09■□□□□ 0.33
PSMC3P17980 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMC3P17980 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 NME2P1-201ENST00000426182 414 ntBASIC17.09■□□□□ 0.33
PSMC3P17980 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 RN7SL692P-201ENST00000464677 288 ntBASIC17.09■□□□□ 0.33
PSMC3P17980 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMC3P17980 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.09■□□□□ 0.33
PSMC3P17980 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.09■□□□□ 0.33
PSMC3P17980 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 SPTSSB-204ENST00000617024 1292 ntBASIC17.09■□□□□ 0.33
PSMC3P17980 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PSMC3P17980 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PSMC3P17980 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMC3P17980 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
PSMC3P17980 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMC3P17980 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMC3P17980 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMC3P17980 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMC3P17980 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PSMC3P17980 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.08■□□□□ 0.33
PSMC3P17980 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMC3P17980 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.08■□□□□ 0.33
PSMC3P17980 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PSMC3P17980 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.08■□□□□ 0.33
PSMC3P17980 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PSMC3P17980 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PSMC3P17980 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PSMC3P17980 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.08■□□□□ 0.32
PSMC3P17980 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.08■□□□□ 0.32
PSMC3P17980 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.08■□□□□ 0.32
PSMC3P17980 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 TUBB8P12-201ENST00000308911 1335 ntBASIC17.08■□□□□ 0.32
PSMC3P17980 TUBB7P-202ENST00000428444 1305 ntBASIC17.08■□□□□ 0.32
PSMC3P17980 TUBB8P7-204ENST00000567960 1332 ntBASIC17.08■□□□□ 0.32
PSMC3P17980 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMC3P17980 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms