Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 AL096865.1-201ENST00000606796 927 ntBASIC16.29■□□□□ 0.2
TIMP2P16035 AL589739.1-201ENST00000607720 493 ntBASIC16.29■□□□□ 0.2
TIMP2P16035 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMP2P16035 AL390754.1-201ENST00000619088 582 ntBASIC16.29■□□□□ 0.2
TIMP2P16035 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TIMP2P16035 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP2P16035 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP2P16035 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP2P16035 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TIMP2P16035 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TIMP2P16035 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMP2P16035 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 OR6D1P-203ENST00000641209 4860 ntBASIC16.28■□□□□ 0.2
TIMP2P16035 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMP2P16035 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP2P16035 HLA-V-204ENST00000476601 1289 ntBASIC16.28■□□□□ 0.2
TIMP2P16035 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP2P16035 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMP2P16035 AL590560.3-201ENST00000623350 461 ntBASIC16.28■□□□□ 0.2
TIMP2P16035 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TIMP2P16035 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP2P16035 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP2P16035 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP2P16035 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMP2P16035 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP2P16035 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP2P16035 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP2P16035 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 RPL37AP1-201ENST00000412502 279 ntBASIC16.27■□□□□ 0.2
TIMP2P16035 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP2P16035 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMP2P16035 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP2P16035 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.27■□□□□ 0.2
TIMP2P16035 AL079307.3-201ENST00000556114 283 ntBASIC16.27■□□□□ 0.2
TIMP2P16035 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP2P16035 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMP2P16035 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMP2P16035 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP2P16035 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP2P16035 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP2P16035 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMP2P16035 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.27■□□□□ 0.19
TIMP2P16035 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 CETN4P-206ENST00000642099 2168 ntBASIC16.27■□□□□ 0.19
TIMP2P16035 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TIMP2P16035 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TIMP2P16035 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TIMP2P16035 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 AC100757.3-201ENST00000622361 1406 ntBASIC16.27■□□□□ 0.19
TIMP2P16035 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP2P16035 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TIMP2P16035 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP2P16035 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP2P16035 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP2P16035 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TIMP2P16035 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP2P16035 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP2P16035 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP2P16035 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms