Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.64■□□□□ 0.73
COL11A2P13942 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
COL11A2P13942 AC134312.5-201ENST00000568031 1313 ntBASIC19.64■□□□□ 0.73
COL11A2P13942 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.64■□□□□ 0.73
COL11A2P13942 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.64■□□□□ 0.73
COL11A2P13942 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL11A2P13942 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.63■□□□□ 0.73
COL11A2P13942 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.63■□□□□ 0.73
COL11A2P13942 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.63■□□□□ 0.73
COL11A2P13942 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AC009053.2-201ENST00000563701 2365 ntBASIC19.63■□□□□ 0.73
COL11A2P13942 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 AL121723.1-201ENST00000445194 1519 ntBASIC19.63■□□□□ 0.73
COL11A2P13942 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A2P13942 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A2P13942 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 AC136604.1-201ENST00000418535 575 ntBASIC19.62■□□□□ 0.73
COL11A2P13942 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 KRT18P43-201ENST00000469825 1281 ntBASIC19.62■□□□□ 0.73
COL11A2P13942 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.62■□□□□ 0.73
COL11A2P13942 ENPP7P5-201ENST00000541031 1031 ntBASIC19.62■□□□□ 0.73
COL11A2P13942 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.62■□□□□ 0.73
COL11A2P13942 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A2P13942 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A2P13942 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A2P13942 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.62■□□□□ 0.73
COL11A2P13942 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A2P13942 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A2P13942 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
COL11A2P13942 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A2P13942 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A2P13942 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A2P13942 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A2P13942 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.61■□□□□ 0.73
COL11A2P13942 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.61■□□□□ 0.73
COL11A2P13942 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A2P13942 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A2P13942 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL11A2P13942 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A2P13942 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A2P13942 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms