Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 ARMC10P1-201ENST00000313754 855 ntBASIC13.66□□□□□ -0.22
CTSDP07339 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CTSDP07339 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 KRT18P35-201ENST00000510488 1269 ntBASIC13.66□□□□□ -0.22
CTSDP07339 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSDP07339 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 AC006486.2-201ENST00000624246 2199 ntBASIC13.66□□□□□ -0.22
CTSDP07339 LINC02228-204ENST00000642115 2962 ntBASIC13.66□□□□□ -0.22
CTSDP07339 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSDP07339 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSDP07339 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CTSDP07339 KRT18P1-202ENST00000452408 1331 ntBASIC13.65□□□□□ -0.22
CTSDP07339 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CTSDP07339 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
CTSDP07339 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.65□□□□□ -0.22
CTSDP07339 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 DRAXINP1-201ENST00000437611 948 ntBASIC13.65□□□□□ -0.22
CTSDP07339 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CTSDP07339 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 AP001350.2-201ENST00000625104 1094 ntBASIC13.65□□□□□ -0.22
CTSDP07339 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 AC016734.2-201ENST00000624325 1377 ntBASIC13.65□□□□□ -0.22
CTSDP07339 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CTSDP07339 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CTSDP07339 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSDP07339 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CTSDP07339 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms