Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOC1P02654 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.58□□□□□ -0.08
APOC1P02654 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 AL513523.2-202ENST00000427283 2040 ntBASIC14.58□□□□□ -0.08
APOC1P02654 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 LINC01144-201ENST00000626198 1710 ntBASIC14.58□□□□□ -0.08
APOC1P02654 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC1P02654 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC1P02654 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
APOC1P02654 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.57□□□□□ -0.08
APOC1P02654 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.57□□□□□ -0.08
APOC1P02654 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.57□□□□□ -0.08
APOC1P02654 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.57□□□□□ -0.08
APOC1P02654 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.57□□□□□ -0.08
APOC1P02654 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
APOC1P02654 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC1P02654 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC1P02654 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
APOC1P02654 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
APOC1P02654 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
APOC1P02654 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
APOC1P02654 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC1P02654 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 FAAHP1-202ENST00000446499 1238 ntBASIC14.56□□□□□ -0.08
APOC1P02654 AC107918.2-201ENST00000530817 355 ntBASIC14.56□□□□□ -0.08
APOC1P02654 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC1P02654 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.56□□□□□ -0.08
APOC1P02654 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.56□□□□□ -0.08
APOC1P02654 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.56□□□□□ -0.08
APOC1P02654 TP73-AS1-207ENST00000624167 988 ntBASIC14.56□□□□□ -0.08
APOC1P02654 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms