Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA1P02647 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 ECEL1P2-202ENST00000465689 757 ntBASIC14.69□□□□□ -0.06
APOA1P02647 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.69□□□□□ -0.06
APOA1P02647 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA1P02647 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
APOA1P02647 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.69□□□□□ -0.06
APOA1P02647 AL136038.4-201ENST00000603606 1261 ntBASIC14.69□□□□□ -0.06
APOA1P02647 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA1P02647 AL391807.1-203ENST00000604392 2365 ntBASIC14.69□□□□□ -0.06
APOA1P02647 CICP24-201ENST00000605464 2705 ntBASIC14.69□□□□□ -0.06
APOA1P02647 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA1P02647 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA1P02647 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
APOA1P02647 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
APOA1P02647 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 LINC00895-201ENST00000629028 1637 ntBASIC14.68□□□□□ -0.06
APOA1P02647 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
APOA1P02647 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.68□□□□□ -0.06
APOA1P02647 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.68□□□□□ -0.06
APOA1P02647 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.68□□□□□ -0.06
APOA1P02647 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
APOA1P02647 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.68□□□□□ -0.06
APOA1P02647 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
APOA1P02647 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 AC006449.6-201ENST00000612330 2296 ntBASIC14.68□□□□□ -0.06
APOA1P02647 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA1P02647 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA1P02647 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA1P02647 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms