Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.49■□□□□ 0.71
MBD4O95243 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 AL662844.4-201ENST00000606367 2838 ntBASIC19.49■□□□□ 0.71
MBD4O95243 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD4O95243 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD4O95243 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD4O95243 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD4O95243 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD4O95243 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD4O95243 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD4O95243 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD4O95243 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD4O95243 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.48■□□□□ 0.71
MBD4O95243 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD4O95243 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.48■□□□□ 0.71
MBD4O95243 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.48■□□□□ 0.71
MBD4O95243 RN7SL828P-201ENST00000607615 303 ntBASIC19.48■□□□□ 0.71
MBD4O95243 AL133215.2-201ENST00000609242 977 ntBASIC19.48■□□□□ 0.71
MBD4O95243 AC073592.8-201ENST00000624126 511 ntBASIC19.48■□□□□ 0.71
MBD4O95243 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD4O95243 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD4O95243 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD4O95243 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD4O95243 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD4O95243 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD4O95243 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 AL035456.1-201ENST00000456064 1369 ntBASIC19.47■□□□□ 0.71
MBD4O95243 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD4O95243 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.47■□□□□ 0.71
MBD4O95243 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.47■□□□□ 0.71
MBD4O95243 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 MIR4321-201ENST00000592276 80 ntBASIC19.47■□□□□ 0.71
MBD4O95243 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 AL138828.2-201ENST00000615812 383 ntBASIC19.47■□□□□ 0.71
MBD4O95243 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD4O95243 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD4O95243 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD4O95243 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD4O95243 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MBD4O95243 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MBD4O95243 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.46■□□□□ 0.71
MBD4O95243 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.46■□□□□ 0.71
MBD4O95243 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.46■□□□□ 0.71
MBD4O95243 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.46■□□□□ 0.71
MBD4O95243 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 SPCS2P1-201ENST00000561636 679 ntBASIC19.46■□□□□ 0.71
MBD4O95243 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms