Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.33■■□□□ 1
LTN1O94822 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.33■■□□□ 1
LTN1O94822 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.33■■□□□ 1
LTN1O94822 TDH-203ENST00000531764 1110 ntBASIC21.33■■□□□ 1
LTN1O94822 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.33■■□□□ 1
LTN1O94822 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.33■■□□□ 1
LTN1O94822 AC133539.2-201ENST00000604757 467 ntBASIC21.33■■□□□ 1
LTN1O94822 AC107373.2-201ENST00000607735 490 ntBASIC21.33■■□□□ 1
LTN1O94822 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LTN1O94822 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
LTN1O94822 AC005052.1-201ENST00000625181 2492 ntBASIC21.33■■□□□ 1
LTN1O94822 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.32■■□□□ 1
LTN1O94822 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.32■■□□□ 1
LTN1O94822 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.32■■□□□ 1
LTN1O94822 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.32■■□□□ 1
LTN1O94822 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LTN1O94822 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.32■■□□□ 1
LTN1O94822 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LTN1O94822 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.32■■□□□ 1
LTN1O94822 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.32■■□□□ 1
LTN1O94822 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.32■■□□□ 1
LTN1O94822 AL359711.2-201ENST00000563105 872 ntBASIC21.32■■□□□ 1
LTN1O94822 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.32■■□□□ 1
LTN1O94822 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.32■■□□□ 1
LTN1O94822 AC134407.2-201ENST00000625089 1978 ntBASIC21.32■■□□□ 1
LTN1O94822 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
LTN1O94822 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.32■■□□□ 1
LTN1O94822 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.31■■□□□ 1
LTN1O94822 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.31■■□□□ 1
LTN1O94822 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LTN1O94822 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LTN1O94822 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.31■■□□□ 1
LTN1O94822 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.31■■□□□ 1
LTN1O94822 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LTN1O94822 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.31■■□□□ 1
LTN1O94822 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
LTN1O94822 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LTN1O94822 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LTN1O94822 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.31■■□□□ 1
LTN1O94822 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTN1O94822 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.31■■□□□ 1
LTN1O94822 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.31■■□□□ 1
LTN1O94822 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.31■■□□□ 1
LTN1O94822 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.31■■□□□ 1
LTN1O94822 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.31■■□□□ 1
LTN1O94822 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.31■■□□□ 1
LTN1O94822 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.31■■□□□ 1
LTN1O94822 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.31■■□□□ 1
LTN1O94822 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LTN1O94822 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.3■■□□□ 1
LTN1O94822 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 AP001282.1-201ENST00000531301 1499 ntBASIC21.3■■□□□ 1
LTN1O94822 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LTN1O94822 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 MSTO2P-201ENST00000314835 1709 ntBASIC21.3■■□□□ 1
LTN1O94822 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LTN1O94822 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LTN1O94822 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LTN1O94822 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.3■■□□□ 1
LTN1O94822 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.3■■□□□ 1
LTN1O94822 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LTN1O94822 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.3■■□□□ 1
LTN1O94822 KRT43P-201ENST00000434019 910 ntBASIC21.3■■□□□ 1
LTN1O94822 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.3■■□□□ 1
LTN1O94822 AC099548.2-209ENST00000480264 625 ntBASIC21.3■■□□□ 1
LTN1O94822 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.3■■□□□ 1
LTN1O94822 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.3■■□□□ 1
LTN1O94822 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LTN1O94822 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.29■■□□□ 1
LTN1O94822 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms