Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.14■□□□□ 0.33
BEST1O76090 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BEST1O76090 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BEST1O76090 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BEST1O76090 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
BEST1O76090 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 PCDHB19P-201ENST00000570871 2371 ntBASIC17.13■□□□□ 0.33
BEST1O76090 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.13■□□□□ 0.33
BEST1O76090 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 MIR770-201ENST00000390219 98 ntBASIC17.13■□□□□ 0.33
BEST1O76090 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.13■□□□□ 0.33
BEST1O76090 AL353705.2-201ENST00000428243 662 ntBASIC17.13■□□□□ 0.33
BEST1O76090 AC055876.3-201ENST00000431496 288 ntBASIC17.13■□□□□ 0.33
BEST1O76090 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.13■□□□□ 0.33
BEST1O76090 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 MIR4321-201ENST00000592276 80 ntBASIC17.13■□□□□ 0.33
BEST1O76090 RN7SL828P-201ENST00000607615 303 ntBASIC17.13■□□□□ 0.33
BEST1O76090 AC138649.4-201ENST00000612222 287 ntBASIC17.13■□□□□ 0.33
BEST1O76090 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST1O76090 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 AL118508.1-201ENST00000613502 2345 ntBASIC17.13■□□□□ 0.33
BEST1O76090 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BEST1O76090 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST1O76090 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BEST1O76090 AC006449.5-201ENST00000610658 2098 ntBASIC17.12■□□□□ 0.33
BEST1O76090 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 AC069120.2-201ENST00000524091 540 ntBASIC17.12■□□□□ 0.33
BEST1O76090 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST1O76090 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST1O76090 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST1O76090 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST1O76090 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BEST1O76090 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 AC006449.6-201ENST00000612330 2296 ntBASIC17.12■□□□□ 0.33
BEST1O76090 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST1O76090 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST1O76090 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BEST1O76090 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST1O76090 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
BEST1O76090 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms