Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM3O75382 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
TRIM3O75382 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 AC092902.6-201ENST00000641783 218 ntBASIC15.35■□□□□ 0.05
TRIM3O75382 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRIM3O75382 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 AC211486.1-202ENST00000416371 468 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC211476.1-201ENST00000503899 468 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC112191.1-201ENST00000523689 701 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 AC087641.1-201ENST00000557561 1021 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 MIR4492-201ENST00000581627 80 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC134684.3-201ENST00000641758 218 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM3O75382 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM3O75382 AC131009.4-201ENST00000624048 1740 ntBASIC15.34■□□□□ 0.05
TRIM3O75382 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM3O75382 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM3O75382 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 AL365209.1-201ENST00000624418 6473 ntBASIC15.33■□□□□ 0.05
TRIM3O75382 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.33■□□□□ 0.05
TRIM3O75382 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIM3O75382 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM3O75382 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 AC092068.3-201ENST00000587894 2016 ntBASIC15.33■□□□□ 0.04
TRIM3O75382 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 AC002056.1-201ENST00000395613 760 ntBASIC15.33■□□□□ 0.04
TRIM3O75382 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
TRIM3O75382 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 AP006288.1-201ENST00000446065 395 ntBASIC15.33■□□□□ 0.04
TRIM3O75382 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM3O75382 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms