Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 LINC02447-202ENST00000501888 2146 ntBASIC15.75■□□□□ 0.11
PRAMEF4O60810 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF4O60810 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF4O60810 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AL671277.1-201ENST00000429656 993 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 ALG1L5P-201ENST00000482043 771 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 PRYP6-201ENST00000514804 343 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AC243562.1-201ENST00000560672 389 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AL135744.1-201ENST00000565098 629 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AC073389.1-201ENST00000595595 795 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AC008677.1-201ENST00000519230 1561 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF4O60810 AC046158.3-201ENST00000624947 2558 ntBASIC15.74■□□□□ 0.11
PRAMEF4O60810 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF4O60810 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 TFAMP1-201ENST00000412727 736 ntBASIC15.73■□□□□ 0.11
PRAMEF4O60810 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 KRT8P48-201ENST00000515599 1220 ntBASIC15.73■□□□□ 0.11
PRAMEF4O60810 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF4O60810 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEF4O60810 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms