Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ZIC3O60481 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC3O60481 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
ZIC3O60481 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC3O60481 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC3O60481 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ZIC3O60481 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 AC084018.2-201ENST00000613093 2607 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC3O60481 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC3O60481 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 AC107890.1-201ENST00000422478 521 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.7□□□□□ -0.06
ZIC3O60481 AC125807.1-201ENST00000483097 614 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.7□□□□□ -0.06
ZIC3O60481 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.7□□□□□ -0.06
ZIC3O60481 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 BANF1P1-201ENST00000553684 263 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 AC140878.1-201ENST00000565277 250 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 AC105021.1-202ENST00000570572 669 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.7□□□□□ -0.06
ZIC3O60481 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 AL355385.1-201ENST00000606123 409 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ZIC3O60481 AC092364.2-201ENST00000596710 2692 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC3O60481 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC3O60481 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC3O60481 AL662844.4-201ENST00000606367 2838 ntBASIC14.7□□□□□ -0.06
ZIC3O60481 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
ZIC3O60481 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.69□□□□□ -0.06
ZIC3O60481 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.69□□□□□ -0.06
ZIC3O60481 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.69□□□□□ -0.06
ZIC3O60481 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.69□□□□□ -0.06
ZIC3O60481 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 RN7SL828P-201ENST00000607615 303 ntBASIC14.69□□□□□ -0.06
ZIC3O60481 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ZIC3O60481 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 AL035456.1-201ENST00000456064 1369 ntBASIC14.69□□□□□ -0.06
ZIC3O60481 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms