Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ACTN4O43707 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.39■□□□□ 0.54
ACTN4O43707 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.39■□□□□ 0.54
ACTN4O43707 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC008677.1-201ENST00000519230 1561 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.39■□□□□ 0.53
ACTN4O43707 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 FER1L4-210ENST00000615531 5998 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ACTN4O43707 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC140658.5-201ENST00000438532 169 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.39■□□□□ 0.53
ACTN4O43707 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC064836.3-201ENST00000607928 673 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 AL078644.1-201ENST00000609881 752 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ACTN4O43707 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTN4O43707 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC025580.3-201ENST00000617932 1424 ntBASIC18.39■□□□□ 0.53
ACTN4O43707 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.39■□□□□ 0.53
ACTN4O43707 AC016027.1-202ENST00000607927 1699 ntBASIC18.38■□□□□ 0.53
ACTN4O43707 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.38■□□□□ 0.53
ACTN4O43707 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 TPM4P1-201ENST00000436100 807 ntBASIC18.38■□□□□ 0.53
ACTN4O43707 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
ACTN4O43707 AC004877.2-201ENST00000623941 599 ntBASIC18.38■□□□□ 0.53
ACTN4O43707 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ACTN4O43707 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ACTN4O43707 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
ACTN4O43707 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTN4O43707 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
ACTN4O43707 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.37■□□□□ 0.53
ACTN4O43707 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.37■□□□□ 0.53
ACTN4O43707 KRT19P2-202ENST00000557173 1012 ntBASIC18.37■□□□□ 0.53
ACTN4O43707 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.37■□□□□ 0.53
ACTN4O43707 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ACTN4O43707 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 AC007064.4-201ENST00000637740 555 ntBASIC18.37■□□□□ 0.53
ACTN4O43707 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 BCAR1-209ENST00000546196 1340 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms