Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HOXA2O43364 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA2O43364 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA2O43364 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HOXA2O43364 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXA2O43364 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXA2O43364 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA2O43364 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.41■□□□□ 0.38
HOXA2O43364 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HOXA2O43364 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA2O43364 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA2O43364 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HOXA2O43364 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HOXA2O43364 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HOXA2O43364 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 AC007274.1-201ENST00000439805 662 ntBASIC17.4■□□□□ 0.38
HOXA2O43364 AC245100.5-201ENST00000452108 331 ntBASIC17.4■□□□□ 0.38
HOXA2O43364 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 AC017083.2-201ENST00000608069 979 ntBASIC17.4■□□□□ 0.38
HOXA2O43364 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
HOXA2O43364 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA2O43364 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA2O43364 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA2O43364 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXA2O43364 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA2O43364 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA2O43364 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA2O43364 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 RN7SL832P-201ENST00000607781 1756 ntBASIC17.39■□□□□ 0.37
HOXA2O43364 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA2O43364 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 AC104596.2-201ENST00000512793 793 ntBASIC17.39■□□□□ 0.37
HOXA2O43364 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA2O43364 AC132938.2-201ENST00000579188 680 ntBASIC17.39■□□□□ 0.37
HOXA2O43364 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HOXA2O43364 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 AL591163.1-201ENST00000641757 987 ntBASIC17.39■□□□□ 0.37
HOXA2O43364 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA2O43364 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA2O43364 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA2O43364 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA2O43364 AL136982.4-201ENST00000437689 1740 ntBASIC17.38■□□□□ 0.37
HOXA2O43364 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HOXA2O43364 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXA2O43364 CROCCP1-201ENST00000426910 5675 ntBASIC17.38■□□□□ 0.37
HOXA2O43364 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA2O43364 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA2O43364 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA2O43364 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA2O43364 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA2O43364 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms