Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLOCKO15516 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.67■□□□□ 0.1
CLOCKO15516 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 AC009533.2-201ENST00000543664 586 ntBASIC15.67■□□□□ 0.1
CLOCKO15516 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 AL031008.1-201ENST00000619963 541 ntBASIC15.67■□□□□ 0.1
CLOCKO15516 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.67■□□□□ 0.1
CLOCKO15516 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 KRT8P49-201ENST00000604166 1432 ntBASIC15.67■□□□□ 0.1
CLOCKO15516 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.67■□□□□ 0.1
CLOCKO15516 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 AC096582.2-201ENST00000510860 516 ntBASIC15.66■□□□□ 0.1
CLOCKO15516 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 AD001527.2-201ENST00000622994 785 ntBASIC15.66■□□□□ 0.1
CLOCKO15516 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.66■□□□□ 0.1
CLOCKO15516 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLOCKO15516 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.66■□□□□ 0.1
CLOCKO15516 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLOCKO15516 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLOCKO15516 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.65■□□□□ 0.1
CLOCKO15516 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.65■□□□□ 0.1
CLOCKO15516 AC079781.3-201ENST00000449110 356 ntBASIC15.65■□□□□ 0.1
CLOCKO15516 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.65■□□□□ 0.1
CLOCKO15516 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.65■□□□□ 0.1
CLOCKO15516 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.65■□□□□ 0.1
CLOCKO15516 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.65■□□□□ 0.1
CLOCKO15516 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLOCKO15516 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLOCKO15516 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms