Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.5■□□□□ 0.39
O00370 MIR3687-1-201ENST00000614492 61 ntBASIC17.5■□□□□ 0.39
O00370 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.5■□□□□ 0.39
O00370 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 CROCCP1-201ENST00000426910 5675 ntBASIC17.5■□□□□ 0.39
O00370 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.5■□□□□ 0.39
O00370 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
O00370 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
O00370 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
O00370 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
O00370 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.49■□□□□ 0.39
O00370 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.49■□□□□ 0.39
O00370 CEND1P1-201ENST00000451006 455 ntBASIC17.49■□□□□ 0.39
O00370 KRT8P48-201ENST00000515599 1220 ntBASIC17.49■□□□□ 0.39
O00370 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.49■□□□□ 0.39
O00370 AC243562.1-201ENST00000560672 389 ntBASIC17.49■□□□□ 0.39
O00370 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
O00370 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
O00370 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
O00370 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
O00370 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.49■□□□□ 0.39
O00370 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
O00370 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
O00370 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
O00370 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
O00370 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 KRT18P13-201ENST00000400056 1290 ntBASIC17.48■□□□□ 0.39
O00370 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
O00370 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.48■□□□□ 0.39
O00370 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.48■□□□□ 0.39
O00370 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.48■□□□□ 0.39
O00370 RN7SL589P-201ENST00000481268 310 ntBASIC17.48■□□□□ 0.39
O00370 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.48■□□□□ 0.39
O00370 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 AC026120.1-201ENST00000611536 926 ntBASIC17.48■□□□□ 0.39
O00370 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.48■□□□□ 0.39
O00370 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.48■□□□□ 0.39
O00370 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
O00370 AC073439.1-201ENST00000624121 1774 ntBASIC17.48■□□□□ 0.39
O00370 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
O00370 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
O00370 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.47■□□□□ 0.39
O00370 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms