Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB4C9JG80 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 TFAMP1-201ENST00000412727 736 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 GPX1P2-201ENST00000429271 606 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AL671277.1-201ENST00000429656 993 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 PGAM5P1-201ENST00000518923 814 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 SPTSSB-204ENST00000617024 1292 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC079328.2-201ENST00000561241 3354 ntBASIC14.47□□□□□ -0.09
NPIPB4C9JG80 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPB4C9JG80 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 FAM220BP-201ENST00000377689 816 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC142381.1-201ENST00000426099 345 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 FAM58CP-201ENST00000435741 640 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 KRT8P23-201ENST00000560090 1207 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC061975.2-201ENST00000581722 295 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 C20orf181-201ENST00000623918 480 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC084121.4-201ENST00000641598 221 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AF228730.8-201ENST00000642140 221 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms