Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 TOMM22P5-201ENST00000416399 439 ntBASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AC126915.1-201ENST00000522847 1038 ntBASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 MIR3907-201ENST00000579424 151 ntBASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 POM121L10P-201ENST00000436994 1285 ntBASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 COX5BP1-201ENST00000507622 393 ntBASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 AC134698.3-201ENST00000523880 214 ntBASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM88BA6NKF7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 AC074338.1-201ENST00000416825 156 ntBASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 AC079336.7-201ENST00000623428 1078 ntBASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM88BA6NKF7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 BCL2-203ENST00000589955 5011 ntBASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 MIR1202-201ENST00000408529 83 ntBASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AC104784.1-201ENST00000473096 294 ntBASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AC018635.2-201ENST00000608625 364 ntBASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms