Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 BCRP1-201ENST00000444246 691 ntBASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 ALG1L8P-201ENST00000533887 760 ntBASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 AC051619.7-201ENST00000568314 623 ntBASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 MIR6080-201ENST00000617359 66 ntBASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TSSC4Q9Y5U2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 UBALD1-205ENST00000590891 2641 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 MIR346-201ENST00000362234 95 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 MIR943-201ENST00000401286 94 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SPDYE14P-201ENST00000442619 822 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC105233.2-201ENST00000523697 349 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AF228730.5-201ENST00000530288 346 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 DUX4L27-201ENST00000554796 1261 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC140878.1-201ENST00000565277 250 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC005498.2-205ENST00000593218 784 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 TCAF2P1-201ENST00000291129 2421 ntBASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TSSC4Q9Y5U2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TSSC4Q9Y5U2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TSSC4Q9Y5U2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms