Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AL021920.2-201ENST00000624828 1351 ntBASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AL603756.1-201ENST00000606511 2163 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 TSSK5P-201ENST00000423978 907 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 KRT18P34-201ENST00000488218 1270 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AL662799.1-202ENST00000614205 422 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 AC022144.1-201ENST00000602255 1580 ntBASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA9Q9Y5G4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 HLA-V-204ENST00000476601 1289 ntBASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AL138918.1-201ENST00000568306 659 ntBASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AC116353.5-201ENST00000638148 1699 ntBASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 AL035456.1-201ENST00000456064 1369 ntBASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms