Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 PCDHA12-202ENST00000613593 2588 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 AC063926.2-201ENST00000623766 1308 ntBASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NCKAP1Q9Y2A7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PIN1P1-201ENST00000412108 996 ntBASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 MRPS18AP1-201ENST00000414458 589 ntBASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 AC005034.1-201ENST00000426657 489 ntBASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TEX28P1-201ENST00000613479 1221 ntBASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TEX28P2-201ENST00000617764 1221 ntBASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1Q9Y2A7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 RPL37AP1-201ENST00000412502 279 ntBASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 HLA-J-202ENST00000469281 1241 ntBASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 AL589702.1-201ENST00000641229 1509 ntBASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NCKAP1Q9Y2A7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms