Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 AL353732.1-201ENST00000569618 1459 ntBASIC18.87■□□□□ 0.61
USP25Q9UHP3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 AC131009.4-201ENST00000624048 1740 ntBASIC18.87■□□□□ 0.61
USP25Q9UHP3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 AC129492.6-201ENST00000611383 1305 ntBASIC18.86■□□□□ 0.61
USP25Q9UHP3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 RPS15P9-201ENST00000494093 319 ntBASIC18.86■□□□□ 0.61
USP25Q9UHP3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 AP005117.1-202ENST00000581724 1908 ntBASIC18.86■□□□□ 0.61
USP25Q9UHP3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP25Q9UHP3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 AL512652.2-201ENST00000625156 1716 ntBASIC18.86■□□□□ 0.61
USP25Q9UHP3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.86■□□□□ 0.61
USP25Q9UHP3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 AC107918.2-201ENST00000530817 355 ntBASIC18.85■□□□□ 0.61
USP25Q9UHP3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.85■□□□□ 0.61
USP25Q9UHP3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 GGT4P-201ENST00000623672 1708 ntBASIC18.85■□□□□ 0.61
USP25Q9UHP3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP25Q9UHP3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms