Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PPARGC1AQ9UBK2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PPARGC1AQ9UBK2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 AC112482.1-201ENST00000492080 688 ntBASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 HYMAI-201ENST00000635591 3347 ntBASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 TSPY26P-202ENST00000565928 3884 ntBASIC17.14■□□□□ 0.33
PPARGC1AQ9UBK2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 AL031731.1-201ENST00000642131 2094 ntBASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 ALG1L5P-201ENST00000482043 771 ntBASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 AC010327.4-202ENST00000591484 748 ntBASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 AL078644.1-201ENST00000609881 752 ntBASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
PPARGC1AQ9UBK2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ELL2P1-201ENST00000413990 1906 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 AL596257.1-201ENST00000641463 2694 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 KRT18P13-201ENST00000400056 1290 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 FAM86C2P-203ENST00000528684 1004 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms