Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 CLK3P2-201ENST00000427566 1453 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC108725.1-201ENST00000495472 409 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AL139099.5-201ENST00000635274 300 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 AC073439.1-201ENST00000624121 1774 ntBASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCDNQ9UBB6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 RNA5SP412-201ENST00000516234 123 ntBASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 RHOQP1-201ENST00000555758 579 ntBASIC16.22■□□□□ 0.19
NCDNQ9UBB6 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 RRP7BP-205ENST00000566851 833 ntBASIC16.22■□□□□ 0.19
NCDNQ9UBB6 MIR3615-201ENST00000581999 87 ntBASIC16.22■□□□□ 0.19
NCDNQ9UBB6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
NCDNQ9UBB6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 AC093525.8-201ENST00000624099 1342 ntBASIC16.21■□□□□ 0.19
NCDNQ9UBB6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 AC012317.2-201ENST00000623305 2251 ntBASIC16.21■□□□□ 0.19
NCDNQ9UBB6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCDNQ9UBB6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms