Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.92■□□□□ 0.78
HMG20BQ9P0W2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AC069120.2-201ENST00000524091 540 ntBASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 BANF1P1-201ENST00000553684 263 ntBASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AL158211.3-201ENST00000607385 239 ntBASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AC006449.5-201ENST00000610658 2098 ntBASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 OR6D1P-203ENST00000641209 4860 ntBASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20BQ9P0W2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 RNA5SP410-201ENST00000516285 106 ntBASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HMG20BQ9P0W2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMG20BQ9P0W2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMG20BQ9P0W2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 FAM8A3P-201ENST00000427218 844 ntBASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms