Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 RPSAP43-201ENST00000402237 625 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 CEND1P1-201ENST00000451006 455 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AC112482.1-201ENST00000492080 688 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 RARRES2P8-201ENST00000566335 367 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AC010327.4-202ENST00000591484 748 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 NORAD-201ENST00000565493 5339 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AL512652.2-201ENST00000625156 1716 ntBASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 ELL2P1-201ENST00000413990 1906 ntBASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 RN7SL589P-201ENST00000481268 310 ntBASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AL078644.1-201ENST00000609881 752 ntBASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 AC092902.6-201ENST00000641783 218 ntBASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms