Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 MIR648-201ENST00000385046 94 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 AC004461.1-201ENST00000412461 403 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 AL592309.1-201ENST00000443127 649 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 AC008677.1-201ENST00000519230 1561 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 KRT8P23-201ENST00000560090 1207 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 AC069224.1-201ENST00000566372 1715 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 MIR4321-201ENST00000592276 80 ntBASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S4Q9NUP1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AC092865.5-201ENST00000545435 363 ntBASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AC061975.2-201ENST00000581722 295 ntBASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AL365330.1-201ENST00000607459 531 ntBASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AC112504.1-201ENST00000623415 1841 ntBASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S4Q9NUP1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 FAM58DP-201ENST00000428076 619 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms