Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C12orf4Q9NQ89 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 GRK6P1-201ENST00000400595 1711 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC104076.2-201ENST00000448912 469 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AL136038.3-201ENST00000561909 1096 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AD001527.2-201ENST00000622994 785 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC073592.5-201ENST00000624854 528 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 OR2I1P-209ENST00000641730 5365 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC087386.2-201ENST00000623212 4637 ntBASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms