Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CXCL1P1-201ENST00000502804 216 ntBASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MIR3909-201ENST00000579518 119 ntBASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 AL592424.1-201ENST00000563624 1536 ntBASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 RNU1-129P-201ENST00000384064 167 ntBASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 HMGA1P7-201ENST00000406908 502 ntBASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 U1.21-201ENST00000580816 167 ntBASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 AC021097.1-201ENST00000607902 574 ntBASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 AL691432.3-201ENST00000621860 400 ntBASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NRIP3Q9NQ35 AC005622.1-201ENST00000636801 1703 ntBASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 MST1L-201ENST00000442552 2185 ntBASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms